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  5. GSVIVT01030266001

GSVIVT01030266001


Description : B2 protein OS=Daucus carota


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030266001
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT3G11000 No alias DCD (Development and Cell Death) domain protein 0.02 OrthoFinder output from all 47 species
Adi_g035185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G036600.1 Ceric.23G036600 not classified & original description: pacid=50611035... 0.03 OrthoFinder output from all 47 species
Dcu_g04918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g07770.1 LOC_Os06g07770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g36163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g16060.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g07596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g36300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015817_P001 Zm00001e015817 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031056_P001 Zm00001e031056 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 498 538
IPR006652 Kelch_1 542 586
IPR006652 Kelch_1 453 491
IPR006652 Kelch_1 400 444
IPR013989 Dev_and_cell_death_domain 45 172
No external refs found!