GSVIVT01030005001

Description : Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS18 component

Gene families : OG0004357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004357_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01030005001
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
Adi_g089360	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.06	OrthoFinder output from all 47 species
Aev_g04175	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.06	OrthoFinder output from all 47 species
Ala_g20601	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.03	OrthoFinder output from all 47 species
Als_g03869	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.07	OrthoFinder output from all 47 species
Aob_g17351	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.03	OrthoFinder output from all 47 species
Ceric.34G031500.1	Ceric.34G031500	component *(VPS18) of HOPS/CORVET membrane tethering...	0.14	OrthoFinder output from all 47 species
Cre07.g328550	No alias	Vesicle trafficking.target membrane...	0.04	OrthoFinder output from all 47 species
Dcu_g13571	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.06	OrthoFinder output from all 47 species
Ehy_g04022	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.03	OrthoFinder output from all 47 species
Gb_14455	No alias	component VPS18 of HOPS/CORVET membrane tethering complexes	0.03	OrthoFinder output from all 47 species
LOC_Os08g08060.1	LOC_Os08g08060	component VPS18 of HOPS/CORVET membrane tethering complexes	0.08	OrthoFinder output from all 47 species
Len_g00750	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.03	OrthoFinder output from all 47 species
Lfl_g02278	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.11	OrthoFinder output from all 47 species
MA_10428812g0030	No alias	component VPS18 of HOPS/CORVET membrane tethering complexes	0.02	OrthoFinder output from all 47 species
MA_10429172g0010	No alias	component VPS18 of HOPS/CORVET membrane tethering complexes	0.04	OrthoFinder output from all 47 species
MA_4063g0010	No alias	component VPS18 of HOPS/CORVET membrane tethering complexes	0.03	OrthoFinder output from all 47 species
Mp4g11360.1	No alias	component VPS18 of HOPS/CORVET membrane tethering complexes	0.13	OrthoFinder output from all 47 species
Nbi_g01433	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.08	OrthoFinder output from all 47 species
Ore_g08914	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.05	OrthoFinder output from all 47 species
Solyc06g005080.4.1	Solyc06g005080	component VPS18 of HOPS/CORVET membrane tethering complexes	0.03	OrthoFinder output from all 47 species
Tin_g11490	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	HCCA
CC	GO:0000145	exocyst	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	HCCA
BP	GO:0022406	membrane docking	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048278	vesicle docking	IEP	HCCA
BP	GO:0051640	organelle localization	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0120227	acyl-CoA binding	IEP	HCCA
BP	GO:0140029	exocytic process	IEP	HCCA
BP	GO:0140056	organelle localization by membrane tethering	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:1901567	fatty acid derivative binding	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007810	Pep3_Vps18	248	401
IPR000547	Clathrin_H-chain/VPS_repeat	598	744

External Links

No external refs found!

GSVIVT01030005001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation