1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01029509001

GSVIVT01029509001


Description : Secondary metabolism.terpenoids.terpenoid synthesis.triterpenoid synthase


Gene families : OG0000781 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000781_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029509001
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G78960 ATLUP2, LUP2 lupeol synthase 2 0.02 OrthoFinder output from all 47 species
GSVIVT01029467001 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01029508001 No alias Secondary metabolism.terpenoids.terpenoid... 0.12 OrthoFinder output from all 47 species
GSVIVT01029514001 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01032217001 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 506 841
IPR032697 SQ_cyclase_N 192 450
No external refs found!