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  5. GSVIVT01029460001

GSVIVT01029460001 (ECT5)


Aliases : ECT5

No description available


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029460001

Target Alias Description ECC score Gene Family Method Actions
AT3G13460 ECT2 evolutionarily conserved C-terminal region 2 0.03 OrthoFinder output from all 47 species
Adi_g061120 ECT7 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061121 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087071 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105413 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47637 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37060 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06040 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18337 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20530 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26970 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G048900.1 ECT8, Ceric.38G048900 methylation reader *(ECT) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g20647 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g12760.1 ECT5, LOC_Os08g12760 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Lfl_g05658 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_26834g0010 ECT8 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Ore_g06556 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26129 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26733 ECT5 methylation reader *(ECT) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g00634 ECT2 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006035 ECT8 methylation reader *(ECT) & original description: CDS=18-1823 0.03 OrthoFinder output from all 47 species
Sam_g13990 No alias methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003961_P003 ECT5, Zm00001e003961 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Zm00001e040047_P001 ECT5, Zm00001e040047 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 422 559
No external refs found!