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  5. GSVIVT01029304001

GSVIVT01029304001


Description : Phytohormones.strigolactone.perception and signal transduction.SMXL signal transducer


Gene families : OG0002073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029304001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252890 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00222400 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.05 OrthoFinder output from all 47 species
AT5G57130 No alias Clp amino terminal domain-containing protein 0.13 OrthoFinder output from all 47 species
Adi_g116697 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33460.1 LOC_Os02g33460 SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species
LOC_Os04g33980.1 LOC_Os04g33980 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Pnu_g08821 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g06494 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
Solyc11g006650.3.1 Solyc11g006650 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Zm00001e014748_P001 Zm00001e014748 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Zm00001e040845_P001 Zm00001e040845 SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 131 166
IPR004176 Clp_R_dom 25 52
No external refs found!