1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01029151001

GSVIVT01029151001 (BIO1)


Aliases : BIO1

Description : Coenzyme metabolism.biotin synthesis.bifunctional diaminopelargonic acid (DAPA) aminotransferase and dethiobiotin synthetase


Gene families : OG0005448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005448_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029151001

Target Alias Description ECC score Gene Family Method Actions
MA_10425873g0020 BIO1 bifunctional diaminopelargonic acid (DAPA)... 0.01 OrthoFinder output from all 47 species
MA_10429638g0010 BIO1 bifunctional diaminopelargonic acid (DAPA)... 0.02 OrthoFinder output from all 47 species
Solyc07g006810.3.1 BIO1, Solyc07g006810 bifunctional diaminopelargonic acid (DAPA)... 0.05 OrthoFinder output from all 47 species
Zm00001e039889_P001 BIO1, Zm00001e039889 bifunctional diaminopelargonic acid (DAPA)... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 609 851
IPR005814 Aminotrans_3 435 538
No external refs found!