GSVIVT01029112001 (CLA, DXS, CLA1, DEF, DXPS2)

Aliases : CLA, DXS, CLA1, DEF, DXPS2

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase

Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01029112001

Target	Alias	Description	ECC score	Gene Family Method
AT3G21500	DXPS1	1-deoxy-D-xylulose 5-phosphate synthase 1	0.03	OrthoFinder output from all 47 species
Ceric.03G088900.1	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Gb_40956	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.03	OrthoFinder output from all 47 species
Ore_g37260	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Pnu_g17578	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016744	transketolase or transaldolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033248	Transketolase_C	592	715
IPR005475	Transketolase-like_Pyr-bd	414	574
IPR005477	Dxylulose-5-P_synthase	91	376

External Links

No external refs found!