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  5. GSVIVT01028900001

GSVIVT01028900001


Description : Protein translocation.chloroplast.inner envelope TIC translocation system.Tic32 component


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028900001
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.05 OrthoFinder output from all 47 species
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.05 OrthoFinder output from all 47 species
AMTR_s00107p00149370 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.05 OrthoFinder output from all 47 species
Aev_g37903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00737.t1 Aspi01Gene00737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16465.t2 Aspi01Gene16465 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24658.t1 Aspi01Gene24658 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56854.t1 Aspi01Gene56854 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63378.t1 Aspi01Gene63378 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63379.t1 Aspi01Gene63379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63380.t1 Aspi01Gene63380 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63398.t1 Aspi01Gene63398 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63408.t1 Aspi01Gene63408 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69014.t1 Aspi01Gene69014 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0265.g060946 No alias not classified & original description: CDS=567-1532 0.02 OrthoFinder output from all 47 species
Ceric.33G016100.1 Ceric.33G016100 not classified & original description: pacid=50607558... 0.04 OrthoFinder output from all 47 species
Dac_g10506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025521001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Gb_09534 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
LOC_Os06g03830.1 LOC_Os06g03830 Short-chain dehydrogenase TIC 32, chloroplastic... 0.09 OrthoFinder output from all 47 species
LOC_Os11g07930.1 LOC_Os11g07930 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.08 OrthoFinder output from all 47 species
Len_g41763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430510g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_42233g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.05 OrthoFinder output from all 47 species
MA_78644g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.04 OrthoFinder output from all 47 species
Nbi_g40152 No alias component *(Tic32) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Ore_g30389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc03g025390.3.1 Solyc03g025390 component Tic32 of inner envelope TIC translocation system 0.05 OrthoFinder output from all 47 species
Tin_g15683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 31 172
No external refs found!