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  5. GSVIVT01028251001

GSVIVT01028251001


No description available


Gene families : OG0006423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028251001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT4G01810 No alias Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
Adi_g085783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04026 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0328.g065288 No alias not classified & original description: CDS=6-2816 0.03 OrthoFinder output from all 47 species
Ceric.18G011400.1 Ceric.18G011400 not classified & original description: pacid=50621847... 0.05 OrthoFinder output from all 47 species
Cre10.g447350 No alias No description available 0.06 OrthoFinder output from all 47 species
Ehy_g08635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34939 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g02920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_300697g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Nbi_g07440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g080850.4.1 Solyc01g080850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g08115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026229_P001 Zm00001e026229 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR006900 Sec23/24_helical_dom 626 722
IPR006896 Sec23/24_trunk_dom 277 503
IPR006895 Znf_Sec23_Sec24 195 228
IPR012990 Sec23_24_beta_S 521 612
No external refs found!