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  5. GSVIVT01028201001

GSVIVT01028201001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0001832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028201001

Target Alias Description ECC score Gene Family Method Actions
Adi_g117297 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g05330 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08245 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g19970.1 LOC_Os05g19970 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_137330g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g21820.1 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Pir_g20081 No alias E3 ubiquitin ligase *(SR1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g068390.3.1 Solyc01g068390 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e000695_P002 Zm00001e000695 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA

No InterPro domains available for this sequence

No external refs found!