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  5. GSVIVT01027992001

GSVIVT01027992001 (NLA, BAH1)


Aliases : NLA, BAH1

Description : Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica


Gene families : OG0001271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027992001

Target Alias Description ECC score Gene Family Method Actions
AT2G38920 No alias SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc... 0.04 OrthoFinder output from all 47 species
Als_g09304 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50450.t1 NLA, BAH1,... E3 ubiquitin ligase *(NLA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01504 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009528 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: CDS=179-1138 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020129 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: CDS=771-1736 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 220 268
No external refs found!