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  5. GSVIVT01027983001

GSVIVT01027983001


Description : ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027983001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00247870 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein FIGL1... 0.05 OrthoFinder output from all 47 species
AT1G50140 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT4G02480 No alias AAA-type ATPase family protein 0.04 OrthoFinder output from all 47 species
Adi_g024938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g061008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G079000.1 Ceric.02G079000 not classified & original description: pacid=50585939... 0.03 OrthoFinder output from all 47 species
Ceric.14G049600.1 Ceric.14G049600 not classified & original description: pacid=50633231... 0.05 OrthoFinder output from all 47 species
Ceric.1Z097100.1 Ceric.1Z097100 not classified & original description: pacid=50640984... 0.06 OrthoFinder output from all 47 species
Ceric.21G078500.1 Ceric.21G078500 not classified & original description: pacid=50604341... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.32 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g13726 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21489 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g31555 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43976 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_15617 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g09487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g17632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428622g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_93384g0010 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
Mp5g19800.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g04513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002972 No alias not classified & original description: CDS=1-3879 0.04 OrthoFinder output from all 47 species
Sam_g29682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo166381 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g110900.4.1 Solyc03g110900 ATPase family AAA domain-containing protein FIGL1... 0.09 OrthoFinder output from all 47 species
Zm00001e001631_P001 Zm00001e001631 ATPase family AAA domain-containing protein FIGL1... 0.05 OrthoFinder output from all 47 species
Zm00001e011359_P005 Zm00001e011359 ATPase family AAA domain-containing protein FIGL1... 0.08 OrthoFinder output from all 47 species
Zm00001e021043_P002 Zm00001e021043 ATPase family AAA domain-containing protein FIGL1... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 1023 1152
No external refs found!