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  5. GSVIVT01027623001

GSVIVT01027623001


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor


Gene families : OG0001094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027623001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00145310 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00145800 evm_27.TU.AmTr_v1... Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
AMTR_s00041p00031550 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 OrthoFinder output from all 47 species
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.08 OrthoFinder output from all 47 species
AT3G43300 ATMIN7, BEN1 HOPM interactor 7 0.12 OrthoFinder output from all 47 species
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.1 OrthoFinder output from all 47 species
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.08 OrthoFinder output from all 47 species
Adi_g019376 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
Adi_g019462 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Aev_g01609 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Aev_g05544 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Aev_g18005 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Ala_g02716 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.08 OrthoFinder output from all 47 species
Als_g01210 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Aob_g07437 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Aop_g08234 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Aop_g37895 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013898 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.08 OrthoFinder output from all 47 species
Azfi_s0048.g030483 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Cba_g01354 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Cba_g14684 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Ceric.10G045100.1 Ceric.10G045100 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Ceric.35G045800.1 ATMIN7, BEN1,... ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000852.23 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Cre09.g390319 EDA10 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 OrthoFinder output from all 47 species
Dcu_g05847 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.15 OrthoFinder output from all 47 species
Dcu_g10762 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.14 OrthoFinder output from all 47 species
Dde_g10500 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.08 OrthoFinder output from all 47 species
Dde_g21336 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
Ehy_g08695 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Ehy_g09277 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.13 OrthoFinder output from all 47 species
Gb_07642 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.11 OrthoFinder output from all 47 species
Gb_26513 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 OrthoFinder output from all 47 species
LOC_Os03g14260.1 LOC_Os03g14260 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.11 OrthoFinder output from all 47 species
LOC_Os07g37750.1 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.14 OrthoFinder output from all 47 species
Len_g10327 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Len_g23975 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Lfl_g02471 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.13 OrthoFinder output from all 47 species
Lfl_g04291 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 OrthoFinder output from all 47 species
MA_157279g0010 EDA10 Brefeldin A-inhibited guanine nucleotide-exchange... 0.07 OrthoFinder output from all 47 species
MA_20138g0010 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
MA_20138g0020 ATMIN7, BEN1 Brefeldin A-inhibited guanine nucleotide-exchange... 0.06 OrthoFinder output from all 47 species
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 OrthoFinder output from all 47 species
MA_9806849g0010 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.06 OrthoFinder output from all 47 species
Mp7g11590.1 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.14 OrthoFinder output from all 47 species
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.13 OrthoFinder output from all 47 species
Msp_g22519 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
Nbi_g01508 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.08 OrthoFinder output from all 47 species
Nbi_g01512 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Ore_g16676 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Ore_g29633 EDA10 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Ore_g30550 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Pir_g10472 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Ppi_g01422 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010565 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018598 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Sam_g11624 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Sam_g29233 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
Smo173646 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Smo85621 ATMIN7, BEN1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc01g091460.3.1 Solyc01g091460 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.14 OrthoFinder output from all 47 species
Solyc01g112340.3.1 Solyc01g112340 Brefeldin A-inhibited guanine nucleotide-exchange... 0.07 OrthoFinder output from all 47 species
Solyc01g112350.3.1 Solyc01g112350 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.13 OrthoFinder output from all 47 species
Solyc12g017830.3.1 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.15 OrthoFinder output from all 47 species
Spa_g09296 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Tin_g02915 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Zm00001e001058_P001 Zm00001e001058 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.14 OrthoFinder output from all 47 species
Zm00001e010568_P001 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.15 OrthoFinder output from all 47 species
Zm00001e037574_P001 Zm00001e037574 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000904 Sec7_dom 585 766
IPR032691 Mon2/Sec7/BIG1-like_HUS 249 471
IPR032817 Mon2_C 1316 1377
IPR015403 Mon2/Sec7/BIG1-like_HDS 1135 1217
IPR032629 DCB_dom 6 213
No external refs found!