1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01027493001

GSVIVT01027493001 (MYB3R-1, ATMYB3R1,...)


Aliases : MYB3R-1, ATMYB3R1, PC-MYB1, MYB3R1, ATMYB3R-1

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027493001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00208260 MYB3R-3,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.05 OrthoFinder output from all 47 species
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.03 OrthoFinder output from all 47 species
Adi_g103148 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54282.t1 MYB1, AtMYB1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g677382 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dac_g32984 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
LOC_Os06g43090.1 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os11g10130.1 BW52, ATMYB52,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_10425867g0020 BW52, ATMYB52, MYB52 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Pir_g26012 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Zm00001e028763_P001 ATMYB3R5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 31 76
No external refs found!