GSVIVT01027438001

Description : Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS8 CORVET-specific component

Gene families : OG0004817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004817_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01027438001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00100p00112150	evm_27.TU.AmTr_v1...	Vesicle trafficking.target membrane...	0.04	OrthoFinder output from all 47 species
AT4G00800	No alias	transducin family protein / WD-40 repeat family protein	0.11	OrthoFinder output from all 47 species
Ala_g12813	No alias	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.07	OrthoFinder output from all 47 species
Aob_g31629	No alias	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.03	OrthoFinder output from all 47 species
Aspi01Gene38237.t1	Aspi01Gene38237	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.03	OrthoFinder output from all 47 species
Ceric.08G032600.1	Ceric.08G032600	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.04	OrthoFinder output from all 47 species
Dcu_g04151	No alias	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.03	OrthoFinder output from all 47 species
Ehy_g19649	No alias	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.04	OrthoFinder output from all 47 species
Gb_27586	No alias	CORVET-specific component VPS8 of HOPS/CORVET membrane...	0.04	OrthoFinder output from all 47 species
LOC_Os02g03220.1	LOC_Os02g03220	CORVET-specific component VPS8 of HOPS/CORVET membrane...	0.03	OrthoFinder output from all 47 species
Len_g19136	No alias	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.04	OrthoFinder output from all 47 species
Lfl_g29102	No alias	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.07	OrthoFinder output from all 47 species
Mp8g08230.1	No alias	CORVET-specific component VPS8 of HOPS/CORVET membrane...	0.06	OrthoFinder output from all 47 species
Pir_g08838	No alias	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.02	OrthoFinder output from all 47 species
Sam_g11618	No alias	CORVET-specific component *(VPS8) of HOPS/CORVET...	0.03	OrthoFinder output from all 47 species
Solyc05g044610.3.1	Solyc05g044610	CORVET-specific component VPS8 of HOPS/CORVET membrane...	0.06	OrthoFinder output from all 47 species
Zm00001e013515_P001	Zm00001e013515	CORVET-specific component VPS8 of HOPS/CORVET membrane...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025941	Vps8_central_dom	961	1145
IPR000547	Clathrin_H-chain/VPS_repeat	1432	1537

External Links

No external refs found!

GSVIVT01027438001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation