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  5. GSVIVT01027171001

GSVIVT01027171001


No description available


Gene families : OG0004504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027171001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00017150 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
AMTR_s00022p00020890 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s01224p00002240 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AT2G46560 No alias transducin family protein / WD-40 repeat family protein 0.19 OrthoFinder output from all 47 species
Adi_g010442 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aev_g19704 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Ala_g36990 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Azfi_s0090.g042626 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g38719 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ceric.37G060800.1 Ceric.37G060800 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.12 OrthoFinder output from all 47 species
Cre04.g223000 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g09007 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g11916 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
LOC_Os01g37120.1 LOC_Os01g37120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g24856 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Lfl_g08851 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.09 OrthoFinder output from all 47 species
MA_10437076g0020 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_177408g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp1g21310.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g25735 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Ore_g29898 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s2320.g028304 No alias not classified & original description: CDS=1-1296 0.05 OrthoFinder output from all 47 species
Sam_g52672 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc01g096110.3.1 Solyc01g096110 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR022033 Rav1p_C 511 1106
IPR001680 WD40_repeat 1967 1999
No external refs found!