GSVIVT01026787001

No description available

Gene families : OG0001115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001115_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01026787001
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00111p00102820	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT3G20230	No alias	Ribosomal L18p/L5e family protein	0.07	OrthoFinder output from all 47 species
Adi_g084304	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g02804	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g70101	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g00447	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g00455	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g47066	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10426381g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Msp_g01826	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09894	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g09242	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012945	No alias	not classified & original description: CDS=16-681	0.03	OrthoFinder output from all 47 species
Solyc01g111810.3.1	Solyc01g111810	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Spa_g16236	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e015482_P001	Zm00001e015482	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005484	Ribosomal_L18	84	196

External Links

No external refs found!

GSVIVT01026787001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation