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  5. GSVIVT01026435001

GSVIVT01026435001


Description : RNA biosynthesis.transcriptional activation.ARID transcription factor


Gene families : OG0002366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026435001

Target Alias Description ECC score Gene Family Method Actions
AT1G76510 No alias ARID/BRIGHT DNA-binding domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g111878 No alias ARID-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13269 No alias ARID-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_103907g0010 No alias transcription factor (ARID) 0.04 OrthoFinder output from all 47 species
Pir_g02235 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06881 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 204 286
IPR001606 ARID_dom 1 81
No external refs found!