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  5. GSVIVT01025872001

GSVIVT01025872001 (UBC10)


Aliases : UBC10

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.UBC-subclass-6 conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025872001

Target Alias Description ECC score Gene Family Method Actions
AT3G13550 EMB144, CIN4, COP10, FUS9 Ubiquitin-conjugating enzyme family protein 0.04 OrthoFinder output from all 47 species
AT4G27960 UBC9 ubiquitin conjugating enzyme 9 0.04 OrthoFinder output from all 47 species
Adi_g029541 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g076665 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00339 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05035.t1 ATUBC11, UBC11,... E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011915 UBC9 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043330 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Cba_g15701 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G065800.1 UBC10, Ceric.03G065800 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G022100.1 UBC10, Ceric.19G022100 E2 MUB ubiquitin-conjugating enzyme & original... 0.05 OrthoFinder output from all 47 species
Ceric.21G043100.1 ATUBC8, UBC8,... E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G049000.1 UBC9, Ceric.23G049000 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Cre06.g292800 UBC30 Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
Dcu_g05263 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20628 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Gb_27882 UBC10 conjugation E2 protein 0.05 OrthoFinder output from all 47 species
LOC_Os01g46926.1 UBC9, LOC_Os01g46926 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Lfl_g31695 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37965 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
MA_10153873g0010 UBC30 Ubiquitin-conjugating enzyme E2 30 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10437205g0010 ATUBC11, UBC11 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Mp3g18170.1 ATUBC11, UBC11 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Mp5g21800.1 UBC10 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Msp_g02640 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48365 No alias E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g007510.3.1 UBC10, Solyc06g007510 conjugation E2 protein 0.1 OrthoFinder output from all 47 species
Solyc06g082595.1.1 UBC10, Solyc06g082595 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Solyc08g008220.3.1 UBC10, Solyc08g008220 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Solyc08g081945.1.1 UBC10, Solyc08g081945 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Spa_g01833 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24617 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26850 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30851 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45237 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06312 ATUBC11, UBC11 E2 MUB ubiquiTin-conjugaTing enzyme & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!