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  5. GSVIVT01025849001

GSVIVT01025849001 (PSRP5)


Aliases : PSRP5

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psPSRP5 component


Gene families : OG0007652 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007652_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025849001
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00213540 PSRP5,... Protein biosynthesis.organelle translation... 0.11 OrthoFinder output from all 47 species
AT3G56910 PSRP5 plastid-specific 50S ribosomal protein 5 0.17 OrthoFinder output from all 47 species
Adi_g102108 No alias component *(cL37) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aev_g35452 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ala_g20889 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Als_g21728 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aob_g03750 No alias component *(cL37) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Azfi_s0004.g008656 No alias component *(cL37) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g30507 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cba_g44083 No alias component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.06G029200.1 Ceric.06G029200 component *(cL37) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Dac_g01920 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dcu_g12621 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Dde_g23334 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ehy_g01939 No alias component *(cL37) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ehy_g31082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g17150.1 PSRP5, LOC_Os01g17150 component psPSRP5 of large ribosomal subunit proteome 0.19 OrthoFinder output from all 47 species
Len_g02486 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g10082 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_317435g0010 PSRP5 component psPSRP5 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Mp6g16600.1 PSRP5 component psPSRP5 of large ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Msp_g01322 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Nbi_g17871 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ore_g28770 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pnu_g08742 No alias component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c5_5090V3.1 Pp3c5_5090 No annotation 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007874 No alias component *(cL37) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g06595 No alias component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc10g081100.3.1 PSRP5, Solyc10g081100 component psPSRP5 of large ribosomal subunit proteome 0.18 OrthoFinder output from all 47 species
Spa_g46739 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Tin_g12594 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Zm00001e017391_P001 PSRP5, Zm00001e017391 component psPSRP5 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
Zm00001e025476_P001 PSRP5, Zm00001e025476 component psPSRP5 of large ribosomal subunit proteome 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!