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  5. GSVIVT01025577001

GSVIVT01025577001


Description : Pathogenesis-related protein 1C OS=Nicotiana tabacum


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025577001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00199860 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00200890 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
AMTR_s00021p00244110 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.1 OrthoFinder output from all 47 species
AMTR_s00059p00174680 evm_27.TU.AmTr_v1... STS14 protein OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
AT1G01310 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.11 OrthoFinder output from all 47 species
AT3G09590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT3G19690 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT4G25780 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.1 OrthoFinder output from all 47 species
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.09 OrthoFinder output from all 47 species
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.07 OrthoFinder output from all 47 species
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT5G02730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
Ala_g21397 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13400 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g57903 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14794.t1 Aspi01Gene14794 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52884.t1 Aspi01Gene52884 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71537.t1 Aspi01Gene71537 CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06229 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G062700.1 Ceric.18G062700 CAPE precursor polypeptide & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.18G062900.1 Ceric.18G062900 CAPE precursor polypeptide & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.18G063000.1 Ceric.18G063000 CAPE precursor polypeptide & original description:... 0.06 OrthoFinder output from all 47 species
Cre06.g278160 No alias Pathogenesis-related protein 1A1 OS=Solanum lycopersicum 0.01 OrthoFinder output from all 47 species
Cre11.g467672 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
Dcu_g13654 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25605 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33701 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08251 No alias CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08900 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19657 No alias CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01036993001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
GSVIVT01037015001 PRB1, ATPRB1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Gb_16215 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54530.1 LOC_Os02g54530 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54540.1 LOC_Os02g54540 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54560.1 LOC_Os02g54560 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54570.1 LOC_Os02g54570 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os04g22210.1 PRB1, ATPRB1,... Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03620.1 ATPR1, PR1, PR... Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os12g43700.1 LOC_Os12g43700 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.07 OrthoFinder output from all 47 species
Len_g34865 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
MA_10314549g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_175771g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_178424g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
MA_2097164g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
MA_77819g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
MA_79998g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
MA_96764g0010 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 146.0) 0.03 OrthoFinder output from all 47 species
Mp3g14110.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g14130.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Mp6g06400.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.01 OrthoFinder output from all 47 species
Msp_g12613 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37136 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38284 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05517 PRB1, ATPRB1 CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g24600 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59472 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_1180V3.1 Pp3c11_1180 CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.01 OrthoFinder output from all 47 species
Ppi_g05598 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.04 OrthoFinder output from all 47 species
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
Solyc01g106600.2.1 Solyc01g106600 Basic form of pathogenesis-related protein 1... 0.09 OrthoFinder output from all 47 species
Solyc01g106640.2.1 Solyc01g106640 Basic form of pathogenesis-related protein 1... 0.05 OrthoFinder output from all 47 species
Solyc02g065470.1.1 Solyc02g065470 STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.03 OrthoFinder output from all 47 species
Solyc08g068990.2.1 Solyc08g068990 Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc09g005950.3.1 Solyc09g005950 Pathogenesis-related protein PRMS OS=Zea mays... 0.05 OrthoFinder output from all 47 species
Spa_g40250 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32203 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e008453_P001 Zm00001e008453 Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Zm00001e016073_P001 Zm00001e016073 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
Zm00001e017920_P002 PRB1, ATPRB1,... Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.06 OrthoFinder output from all 47 species
Zm00001e023732_P001 Zm00001e023732 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.05 OrthoFinder output from all 47 species
Zm00001e026690_P001 Zm00001e026690 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.08 OrthoFinder output from all 47 species
Zm00001e032607_P001 Zm00001e032607 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e033272_P001 Zm00001e033272 Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 80 196
No external refs found!