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Aliases : UPL4
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase
Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01025537001 | |
| Cluster | HCCA: Cluster_92 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g077989 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g49450 | UPL3, KAK | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02725 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g14715 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13609 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011365 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: CDS=427-5601 | 0.03 | OrthoFinder output from all 47 species | |
| Cre07.g312900 | UPL3, KAK | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08697 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g38830.1 | UPL4, LOC_Os05g38830 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g24750.1 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g00722 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13943 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g13561 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25807 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17671 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g44877 | UPL4 | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009013 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: CDS=326-6067 | 0.03 | OrthoFinder output from all 47 species | |
| Smo146155 | UPL3, KAK | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03560 | UPL3, KAK | E3 ubiquiTin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013385_P003 | UPL3, KAK, Zm00001e013385 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006658 | phosphatidylserine metabolic process | IEP | HCCA |
| BP | GO:0006659 | phosphatidylserine biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000569 | HECT_dom | 1205 | 1487 |
| No external refs found! |