No description available
Gene families : OG0001489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001489_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01025195001 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00148p00040560 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
AT1G30470 | No alias | SIT4 phosphatase-associated family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g075656 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g080381 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g23509 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g15062 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g60684 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g61175 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g12504 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g14590 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene10739.t1 | Aspi01Gene10739 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000113.33 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g484150 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Gb_14287 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g51490.1 | LOC_Os05g51490 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Len_g22543 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g09902 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_600146g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g06306 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g19157 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g06487 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g39441 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g52268 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo419685 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g069780.3.1 | Solyc02g069780 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g011665.1.1 | Solyc06g011665 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Spa_g31041 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e020549_P002 | Zm00001e020549 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e027801_P001 | Zm00001e027801 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003689 | DNA clamp loader activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005663 | DNA replication factor C complex | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |