GSVIVT01025195001


No description available


Gene families : OG0001489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001489_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025195001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00040560 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G30470 No alias SIT4 phosphatase-associated family protein 0.04 OrthoFinder output from all 47 species
Adi_g075656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g60684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61175 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10739.t1 Aspi01Gene10739 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.33 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g484150 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_14287 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g51490.1 LOC_Os05g51490 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g22543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g09902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_600146g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g06306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19157 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo419685 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc02g069780.3.1 Solyc02g069780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g011665.1.1 Solyc06g011665 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g31041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020549_P002 Zm00001e020549 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e027801_P001 Zm00001e027801 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007587 SAPS 356 490
IPR007587 SAPS 131 355
No external refs found!