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  5. GSVIVT01024710001

GSVIVT01024710001


Description : Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana


Gene families : OG0001301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024710001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00158970 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00065p00110200 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00078p00164770 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
AMTR_s00099p00066170 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT2G30020 No alias Protein phosphatase 2C family protein 0.11 OrthoFinder output from all 47 species
Adi_g079500 PP2C5, ATHPP2C5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g14659 No alias clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07470 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28060 No alias clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g17266 No alias clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41535 No alias clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07103 No alias clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13821 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06701.t1 Aspi01Gene06701 clade B phosphatase & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene67179.t1 Aspi01Gene67179 clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.33G047800.1 Ceric.33G047800 clade B phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g05168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27780 No alias clade B phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g39979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39980 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g00785 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13761 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40834 No alias clade B phosphatase 0.05 OrthoFinder output from all 47 species
LOC_Os03g18150.1 LOC_Os03g18150 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.15 OrthoFinder output from all 47 species
LOC_Os11g13820.1 PP2C5, ATHPP2C5,... Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os12g09640.1 LOC_Os12g09640 Probable protein phosphatase 2C 77 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g23780 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g12331 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.07 OrthoFinder output from all 47 species
MA_10365511g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426697g0020 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10429333g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10430806g0020 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10431780g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_10432464g0020 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10435129g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_107720g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_1274g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_128174g0010 PP2C5, ATHPP2C5 Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_12940g0010 No alias histone (H2B) 0.06 OrthoFinder output from all 47 species
MA_134564g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_153040g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_1556703g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_166433g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_166433g0020 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_176702g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_176702g0030 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_177086g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_182759g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_183946g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_223907g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_3395g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_749790g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8110430g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_87559g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9664807g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp6g11540.1 No alias clade B phosphatase 0.08 OrthoFinder output from all 47 species
Msp_g10956 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g24387 No alias clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33412 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g10522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo13829 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc05g052520.3.1 Solyc05g052520 Probable protein phosphatase 2C 30 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Solyc06g007190.4.1 Solyc06g007190 Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g16375 No alias clade B phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g23587 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g39221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08957 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001318_P001 Zm00001e001318 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Zm00001e011044_P001 Zm00001e011044 Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e038411_P002 Zm00001e038411 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 12 232
No external refs found!