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  5. GSVIVT01024201001

GSVIVT01024201001 (MCT2)


Aliases : MCT2

Description : Protein terminal ear1 OS=Zea mays


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024201001
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.03 OrthoFinder output from all 47 species
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.04 OrthoFinder output from all 47 species
Ceric.02G098500.1 TEL1, Ceric.02G098500 not classified & original description: pacid=50585133... 0.05 OrthoFinder output from all 47 species
Ceric.04G093800.1 MCT1, Ceric.04G093800 not classified & original description: pacid=50631316... 0.04 OrthoFinder output from all 47 species
Ceric.39G026900.1 TEL1, Ceric.39G026900 not classified & original description: pacid=50582960... 0.04 OrthoFinder output from all 47 species
Dac_g14075 TEL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20398 TEL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31780 MCT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20291 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006958 TEL1 not classified & original description: CDS=1-1983 0.03 OrthoFinder output from all 47 species
Tin_g44662 TEL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 28 101
No external refs found!