GSVIVT01024162001 (ATBPC4, BPC4, BBR)


Aliases : ATBPC4, BPC4, BBR

Description : RNA biosynthesis.transcriptional activation.BBR/BPC transcription factor


Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024162001

Target Alias Description ECC score Gene Family Method Actions
Adi_g055055 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g119680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11927 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008725 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010781 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g05776 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G050800.1 BPC3, ATBPC3,... BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G015100.1 BPC3, ATBPC3,... BBR/BPC-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01009845001 BPC6, BBR/BPC6, ATBPC6 RNA biosynthesis.transcriptional activation.BBR/BPC... 0.04 OrthoFinder output from all 47 species
GSVIVT01011589001 ATBPC1, BPC1, BBR RNA biosynthesis.transcriptional activation.BBR/BPC... 0.03 OrthoFinder output from all 47 species
LOC_Os06g04010.2 BPC6, BBR/BPC6,... transcription factor (BBR/BPC) 0.03 OrthoFinder output from all 47 species
LOC_Os10g02584.3 ATBPC2, BPC2,... transcription factor (BBR/BPC) 0.04 OrthoFinder output from all 47 species
Len_g05321 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03797 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12726 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01840 BPC7, ATBPC7, BBR BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022516 ATBPC2, BPC2, BBR/BPC2 subunit beta of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Spa_g02176 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54835 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 106 248
IPR010409 GAGA-bd_tscrpt_act 1 104
No external refs found!