1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01023801001

GSVIVT01023801001


No description available


Gene families : OG0004018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004018_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023801001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00229900 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G25730 No alias FtsJ-like methyltransferase family protein 0.17 OrthoFinder output from all 47 species
Adi_g084654 No alias MRM2-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22298 No alias MRM2-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007467 No alias MRM2-type rRNA methyltransferase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.33G005200.1 Ceric.33G005200 MRM2-type rRNA methyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Cre12.g529500 No alias No description available 0.16 OrthoFinder output from all 47 species
Dac_g07280 No alias MRM2-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g49230.1 LOC_Os05g49230 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g20213 No alias MRM2-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02148 No alias MRM2-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429557g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_158214g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp8g14990.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g20920 No alias MRM2-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15947 No alias MRM2-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g020810.2.1 Solyc11g020810 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Spa_g06497 No alias MRM2-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026556_P001 Zm00001e026556 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e032456_P001 Zm00001e032456 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024576 rRNA_MeTfrase_Spb1_DUF3381 234 381
IPR002877 RNA_MeTrfase_FtsJ_dom 22 200
No external refs found!