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No description available
Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01023743001 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00143370 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00088p00044260 | evm_27.TU.AmTr_v1... | No description available | 0.01 | OrthoFinder output from all 47 species | |
| AT1G23995 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT1G70270 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42870 | PAR1, HLH1 | phy rapidly regulated 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G43060 | IBH1 | ILI1 binding bHLH 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G47270 | UPB1 | sequence-specific DNA binding transcription... | 0.05 | OrthoFinder output from all 47 species | |
| AT3G05800 | AIF1 | AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G17100 | No alias | sequence-specific DNA binding transcription factors | 0.05 | OrthoFinder output from all 47 species | |
| AT4G30410 | No alias | sequence-specific DNA binding transcription factors | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g07118 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g42814 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g20907 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g25846 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g37001 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05093 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g64583 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29507.t1 | Aspi01Gene29507 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene42998.t1 | IBH1, Aspi01Gene42998 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29136 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G057100.1 | AIF1, Ceric.04G057100 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g13027 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g39770 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_14678 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41382 | No alias | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g43950.1 | AIF1, LOC_Os01g43950 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g08220.1 | LOC_Os02g08220 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g48900.1 | LOC_Os07g48900 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_136773g0010 | No alias | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| MA_136890g0010 | No alias | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| MA_44257g0010 | No alias | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| MA_472240g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_92262g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_946997g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_96570g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05867 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g42615 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22711 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g009510.1.1 | UPB1, Solyc06g009510 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g042010.1.1 | Solyc12g042010 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001479_P001 | Zm00001e001479 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e038315_P001 | Zm00001e038315 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | HCCA |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005230 | extracellular ligand-gated monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| MF | GO:0008066 | glutamate receptor activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0022824 | transmitter-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| MF | GO:0038023 | signaling receptor activity | IEP | HCCA |
| MF | GO:0060089 | molecular transducer activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |