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  5. GSVIVT01023259001

GSVIVT01023259001


Description : External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel


Gene families : OG0001870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023259001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00141460 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62127.t1 Aspi01Gene62127 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62130.t1 Aspi01Gene62130 calcium cation channel *(DMI1/Pollux/Castor) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g13614 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g35779 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.02 OrthoFinder output from all 47 species
Ore_g43521 No alias calcium cation channel *(DMI1/Pollux/Castor) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR010420 CASTOR/POLLUX/SYM8_dom 429 526
No external refs found!