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  5. GSVIVT01023010001

GSVIVT01023010001 (ATIMD2, IMD2)


Aliases : ATIMD2, IMD2

Description : Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate dehydrogenase


Gene families : OG0004491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023010001

Target Alias Description ECC score Gene Family Method Actions
Als_g00711 ATIMD2, IMD2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009200 ATIMD2, IMD2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Nbi_g11700 ATIMD2, IMD2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Smo111515 ATIMD2, IMD2 Secondary metabolism.nitrogen-containing secondary... 0.03 OrthoFinder output from all 47 species
Spa_g08389 ATIMD2, IMD2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR024084 IsoPropMal-DH-like_dom 146 494
No external refs found!