GSVIVT01022979001

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01022979001
Cluster	HCCA: Cluster_226

Target	Alias	Description	ECC score	Gene Family Method
AT3G25505	No alias	No description available	0.03	OrthoFinder output from all 47 species
Aob_g37569	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g08743	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g33283	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01026001001	No alias	External stimuli response.biotic stress.pathogen...	0.07	OrthoFinder output from all 47 species
GSVIVT01029009001	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01036294001	No alias	External stimuli response.biotic stress.pathogen...	0.06	OrthoFinder output from all 47 species
GSVIVT01036405001	No alias	External stimuli response.biotic stress.pathogen...	0.07	OrthoFinder output from all 47 species
GSVIVT01037180001	No alias	External stimuli response.biotic stress.pathogen...	0.06	OrthoFinder output from all 47 species
GSVIVT01037221001	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.09	OrthoFinder output from all 47 species
Gb_09783	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
MA_10426286g0010	No alias	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
MA_408380g0010	No alias	effector receptor (NLR)	0.06	OrthoFinder output from all 47 species
MA_90690g0020	No alias	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
MA_9394663g0010	No alias	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
Pir_g47005	No alias	effector receptor *(NLR) & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g50960	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc07g055380.1.1	Solyc07g055380	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Solyc07g055390.1.1	Solyc07g055390	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	20	194
IPR002182	NB-ARC	212	306

External Links

No external refs found!

GSVIVT01022979001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation