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  5. GSVIVT01022879001

GSVIVT01022879001


Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin


Gene families : OG0005260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022879001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00059110 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
AT4G27640 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g008189 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Ala_g03927 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.09 OrthoFinder output from all 47 species
Als_g05135 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.05 OrthoFinder output from all 47 species
Aob_g12570 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene40058.t1 Aspi01Gene40058 nucleocytoplasmic import karyopherin *(IMB4) & original... 0.04 OrthoFinder output from all 47 species
Ceric.27G000100.1 Ceric.27G000100 nucleocytoplasmic import karyopherin *(IMB4) & original... 0.07 OrthoFinder output from all 47 species
Dcu_g04972 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.15 OrthoFinder output from all 47 species
Len_g14349 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g10041 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.04 OrthoFinder output from all 47 species
MA_10061366g0010 No alias IMB4 nucleocytoplasmic import karyopherin 0.12 OrthoFinder output from all 47 species
MA_10435245g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g01470.1 No alias IMB4 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Msp_g13617 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g104070.3.1 Solyc01g104070 IMB4 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Tin_g15675 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e001127_P004 Zm00001e001127 IMB4 nucleocytoplasmic import karyopherin 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000357 HEAT 379 409
IPR001494 Importin-beta_N 23 87
No external refs found!