GSVIVT01022837001

Description : Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana

Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01022837001
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AT3G14470	No alias	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
GSVIVT01000635001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01000656001	HRT, RCY1, RPP8	Putative disease resistance protein At3g14460...	0.05	OrthoFinder output from all 47 species
GSVIVT01000663001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
GSVIVT01012436001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01013307001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01022856001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01022861001	No alias	No description available	0.04	OrthoFinder output from all 47 species
GSVIVT01022941001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01022965001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01032199001	No alias	Disease resistance protein RGA2 OS=Solanum bulbocastanum	0.04	OrthoFinder output from all 47 species
GSVIVT01036628001	RPM1, RPS3	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01036657001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01037447001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
LOC_Os01g17130.1	LOC_Os01g17130	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
LOC_Os04g43340.1	LOC_Os04g43340	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
LOC_Os05g34220.1	LOC_Os05g34220	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
LOC_Os07g17250.1	LOC_Os07g17250	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
LOC_Os08g43050.1	LOC_Os08g43050	Putative disease resistance protein RGA1 OS=Solanum...	0.03	OrthoFinder output from all 47 species
Solyc08g007630.1.1	Solyc08g007630	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0008066	glutamate receptor activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022835	transmitter-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030594	neurotransmitter receptor activity	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	66	270

External Links

No external refs found!

GSVIVT01022837001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation