GSVIVT01022468001 (PDE318)


Aliases : PDE318

Description : Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana


Gene families : OG0006383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006383_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022468001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00146270 PDE318,... Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT1G80770 PDE318 P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045731 PDE318 not classified & original description: CDS=36-1517 0.05 OrthoFinder output from all 47 species
Cba_g09822 PDE318 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre08.g384355 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g46412 PDE318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02181 PDE318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02848 PDE318 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g06230.1 PDE318, LOC_Os08g06230 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp7g04840.1 PDE318 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Pir_g10243 PDE318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo443180 PDE318 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc09g090460.3.1 PDE318, Solyc09g090460 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e040209_P002 PDE318, Zm00001e040209 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR010674 NOG1_Rossman_fold_dom 314 370
IPR030389 G_FEOB_dom 249 306
No external refs found!