1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01022130001

GSVIVT01022130001


No description available


Gene families : OG0005304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005304_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022130001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00165720 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G36980 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Als_g49629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G057000.1 Ceric.10G057000 not classified & original description: pacid=50611979... 0.03 OrthoFinder output from all 47 species
Cre12.g498350 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g32139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428744g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g090850.3.1 Solyc02g090850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e001915_P001 Zm00001e001915 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019147 SWAP_N_domain 41 176
No external refs found!