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  5. GSVIVT01022126001

GSVIVT01022126001


Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022126001

Target Alias Description ECC score Gene Family Method Actions
Adi_g079530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07546 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g27115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g090910.3.1 Solyc02g090910 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g16749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 226 280
IPR000504 RRM_dom 5 63
IPR000504 RRM_dom 94 150
No external refs found!