- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase
Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00133270 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT4G34040 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05529 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g20481 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene55614.t1 | Aspi01Gene55614 | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11940 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12443 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011840001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g49770.1 | LOC_Os01g49770 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g51400.2 | LOC_Os04g51400 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g24167 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g107930.3.1 | Solyc01g107930 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g008840.2.1 | Solyc05g008840 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g062720.3.1 | Solyc07g062720 | Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004451 | isocitrate lyase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 97 | 139 |
| No external refs found! |