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  5. GSVIVT01021979001

GSVIVT01021979001 (MEE32, EMB3004)


Aliases : MEE32, EMB3004

Description : Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase


Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021979001

Target Alias Description ECC score Gene Family Method Actions
Als_g16496 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.12 OrthoFinder output from all 47 species
Cba_g39092 MEE32, EMB3004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12106 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010226 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
InterPro domains Description Start Stop
IPR013708 Shikimate_DH-bd_N 327 404
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 447 518
IPR001381 DHquinase_I 96 313
No external refs found!