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GSVIVT01021727001


Description : Patellin-4 OS=Arabidopsis thaliana


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021727001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00086020 evm_27.TU.AmTr_v1... Patellin-6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ceric.30G034100.1 Ceric.30G034100 not classified & original description: pacid=50608594... 0.07 OrthoFinder output from all 47 species
GSVIVT01030264001 No alias Patellin-6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g27820.1 LOC_Os05g27820 Patellin-6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os06g45990.2 LOC_Os06g45990 Patellin-4 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010754 No alias not classified & original description: CDS=1-1695 0.06 OrthoFinder output from all 47 species
Solyc02g070210.3.1 Solyc02g070210 Patellin-4 OS=Arabidopsis thaliana... 0.18 OrthoFinder output from all 47 species
Solyc06g064940.3.1 Solyc06g064940 Patellin-5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e026912_P001 Zm00001e026912 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e031502_P004 Zm00001e031502 Patellin-6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 173 332
IPR011074 CRAL/TRIO_N_dom 94 148
No external refs found!