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  5. GSVIVT01021169001

GSVIVT01021169001 (CH42, CHLI1, CH-42,...)


Aliases : CH42, CHLI1, CH-42, CHL11, CHLI-1

Description : Enzyme classification.EC_6 ligases.EC_6.6 ligase forming nitrogen-metal bond(50.6.6 : 365.1) & Magnesium-chelatase subunit ChlI, chloroplastic OS=Nicotiana tabacum


Gene families : OG0004301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021169001
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00167540 CH42, CHLI1,... Enzyme classification.EC_6 ligases.EC_6.6 ligase forming... 0.03 OrthoFinder output from all 47 species
AT4G18480 CH42, CHLI1,... P-loop containing nucleoside triphosphate hydrolases... 0.26 OrthoFinder output from all 47 species
AT5G45930 CHL I2, CHLI2, CHLI-2 magnesium chelatase i2 0.14 OrthoFinder output from all 47 species
Adi_g012498 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.08 OrthoFinder output from all 47 species
Aev_g48552 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Ala_g27481 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Aob_g42788 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Aop_g10481 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.09 OrthoFinder output from all 47 species
Aspi01Gene13384.t2 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G027500.1 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.35G036500.1 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Cre06.g306300 CH42, CHLI1,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.08 OrthoFinder output from all 47 species
Cre12.g510800 CH42, CHLI1,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.1 OrthoFinder output from all 47 species
Dac_g09931 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
Dcu_g15308 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
Dde_g16751 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04604 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
Gb_27010 CH42, CHLI1,... component CHL-I of magnesium-chelatase complex 0.11 OrthoFinder output from all 47 species
LOC_Os03g36540.1 CHL I2, CHLI2,... component CHL-I of magnesium-chelatase complex 0.12 OrthoFinder output from all 47 species
Len_g10550 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.09 OrthoFinder output from all 47 species
Lfl_g06951 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
MA_48250g0010 CH42, CHLI1,... component CHL-I of magnesium-chelatase complex 0.06 OrthoFinder output from all 47 species
Mp2g21150.1 CHL I2, CHLI2, CHLI-2 component CHL-I of magnesium-chelatase complex 0.17 OrthoFinder output from all 47 species
Msp_g07868 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.08 OrthoFinder output from all 47 species
Ore_g35827 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Pp3c10_2940V3.1 CH42, CHLI1,... P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Ppi_g10566 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024301 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
Smo230423 CHL I2, CHLI2, CHLI-2 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 OrthoFinder output from all 47 species
Solyc10g008740.3.1 CH42, CHLI1,... component CHL-I of magnesium-chelatase complex 0.1 OrthoFinder output from all 47 species
Zm00001e039463_P003 CHL I2, CHLI2,... component CHL-I of magnesium-chelatase complex 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!