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  5. GSVIVT01021159001

GSVIVT01021159001 (GLR2.7, ATGLR2.7)


Aliases : GLR2.7, ATGLR2.7

Description : Solute transport.channels.GLR ligand-gated cation channel


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021159001

Target Alias Description ECC score Gene Family Method Actions
AT3G07520 GLR1.4, ATGLR1.4 glutamate receptor 1.4 0.05 OrthoFinder output from all 47 species
AT5G11180 ATGLR2.6, GLR2.6 glutamate receptor 2.6 0.03 OrthoFinder output from all 47 species
Aob_g07200 ATGLR3.2,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g60359 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g12536 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26589 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014244001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
GSVIVT01021161001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
GSVIVT01033142001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.06 OrthoFinder output from all 47 species
Gb_26917 GLR2.7, ATGLR2.7 ligand-gated cation channel (GLR) 0.06 OrthoFinder output from all 47 species
LOC_Os06g08930.1 GLR2.8,... ligand-gated cation channel (GLR) 0.05 OrthoFinder output from all 47 species
LOC_Os07g01310.1 GLUR3, GLR3.4,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Len_g45939 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12610 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15165 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01909 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 1183 1210
IPR001320 Iontro_rcpt_C 38 256
IPR001638 Solute-binding_3/MltF_N 865 1182
IPR001828 ANF_lig-bd_rcpt 440 768
No external refs found!