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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL13a component
Gene families : OG0001291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001291_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01021080001 | |
| Cluster | HCCA: Cluster_62 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00044p00144180 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00089p00040540 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
| AT3G07110 | No alias | Ribosomal protein L13 family protein | 0.11 | OrthoFinder output from all 47 species | |
| AT3G24830 | No alias | Ribosomal protein L13 family protein | 0.16 | OrthoFinder output from all 47 species | |
| AT4G13170 | No alias | Ribosomal protein L13 family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G48760 | No alias | Ribosomal protein L13 family protein | 0.16 | OrthoFinder output from all 47 species | |
| Adi_g124594 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g06438 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00711 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g12384 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g26514 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62167 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06902 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Aop_g22675 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0075.g037721 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Azfi_s0272.g061284 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Azfi_s0594.g078801 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g09451 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.05G058300.1 | Ceric.05G058300 | component *(uL13) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.20G024700.1 | Ceric.20G024700 | component *(uL13) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000792.29 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Cre12.g532550 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.19 | OrthoFinder output from all 47 species | |
| Dac_g00316 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Dcu_g06037 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Dcu_g34535 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g02053 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01028661001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g54890.1 | LOC_Os03g54890 | component RPL13a of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os07g01870.1 | LOC_Os07g01870 | component RPL13a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Len_g10030 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g21734 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| MA_186340g0010 | No alias | component RPL13a of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| Mp2g08690.1 | No alias | component RPL13a of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| Mp4g15790.1 | No alias | component RPL13a of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g06781 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Nbi_g04609 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Nbi_g12434 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10936 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g10937 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g10938 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01822 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c11_17280V3.1 | Pp3c11_17280 | Ribosomal protein L13 family protein | 0.08 | OrthoFinder output from all 47 species | |
| Pp3c19_10330V3.1 | Pp3c19_10330 | Ribosomal protein L13 family protein | 0.1 | OrthoFinder output from all 47 species | |
| Pp3c1_15830V3.1 | Pp3c1_15830 | Ribosomal protein L13 family protein | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c2_20550V3.1 | Pp3c2_20550 | Ribosomal protein L13 family protein | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g25630 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g05746 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g06363 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07579 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g14121 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g14122 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g28928 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g31286 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Smo166650 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc05g053670.3.1 | Solyc05g053670 | component RPL13a of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
| Solyc09g091740.4.1 | Solyc09g091740 | component RPL13a of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
| Spa_g10532 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g15627 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g15628 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g22049 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g34128 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g44762 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g00453 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g34122 | No alias | component *(uL13) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005719_P002 | Zm00001e005719 | component RPL13a of LSU proteome component | 0.16 | OrthoFinder output from all 47 species | |
| Zm00001e012017_P002 | Zm00001e012017 | component RPL13a of LSU proteome component | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |