Aliases : VCL1, EMB258, MAN
Description : Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS16/VCL1 component
Gene families : OG0004533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004533_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g06149 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.03 | OrthoFinder output from all 47 species | |
Als_g01127 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g07384 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g08601 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g04890 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g20947 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.03 | OrthoFinder output from all 47 species | |
Gb_09954 | VCL1, EMB258, MAN | component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g47650.1 | VCL1, EMB258,... | component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g10179 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.06 | OrthoFinder output from all 47 species | |
MA_74180g0010 | VCL1, EMB258, MAN | Protein VACUOLELESS1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Mp6g01660.1 | VCL1, EMB258, MAN | component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes | 0.03 | OrthoFinder output from all 47 species | |
Ore_g19088 | VCL1, EMB258, MAN | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g25104 | No alias | component *(VPS16/VCL1) of HOPS/CORVET membrane... | 0.02 | OrthoFinder output from all 47 species | |
Smo80688 | VCL1, EMB258, MAN | Vesicle trafficking.target membrane... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g056220.3.1 | VCL1, EMB258,... | component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e028014_P001 | VCL1, EMB258,... | component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005737 | cytoplasm | IEA | Interproscan |
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003779 | actin binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008565 | obsolete protein transporter activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No external refs found! |