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  5. GSVIVT01020819001

GSVIVT01020819001


Description : WD repeat-containing protein 26 homolog OS=Arabidopsis thaliana


Gene families : OG0002376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020819001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186000 evm_27.TU.AmTr_v1... WD repeat-containing protein WDS homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre08.g382515 No alias WD repeat-containing protein WDS homolog OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g16239 No alias component *(GID7) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
Pnu_g05808 No alias component *(GID7) of GID ubiquitination complex &... 0.03 OrthoFinder output from all 47 species
Tin_g02791 No alias component *(GID7) of GID ubiquiTination complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 406 443
IPR001680 WD40_repeat 363 400
IPR001680 WD40_repeat 235 273
IPR001680 WD40_repeat 196 231
No external refs found!