GSVIVT01020763001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0002683 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002683_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020763001

Target Alias Description ECC score Gene Family Method Actions
AT3G58720 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g005573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g52460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G047800.1 Ceric.35G047800 not classified & original description: pacid=50581496... 0.04 OrthoFinder output from all 47 species
Ehy_g22057 RMR1, ATRMR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g055330.3.1 Solyc07g055330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 183 225
No external refs found!