1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01020704001

GSVIVT01020704001


Description : Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020704001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT3G24450 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g40445 CCH copper chaperone *(ATX/CCH) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01034760001 No alias Nutrient uptake.copper uptake.reduction-based uptake.CCH... 0.07 OrthoFinder output from all 47 species
Gb_00188 HIPP20 Heavy metal-associated isoprenylated plant protein 20... 0.04 OrthoFinder output from all 47 species
Gb_09038 HIPP20 Heavy metal-associated isoprenylated plant protein 20... 0.03 OrthoFinder output from all 47 species
Gb_20916 HIPP20 Heavy metal-associated isoprenylated plant protein 20... 0.02 OrthoFinder output from all 47 species
Gb_29259 No alias Heavy metal-associated isoprenylated plant protein 37... 0.04 OrthoFinder output from all 47 species
LOC_Os06g35060.1 LOC_Os06g35060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g20000.1 LOC_Os09g20000 Heavy metal-associated isoprenylated plant protein 20... 0.06 OrthoFinder output from all 47 species
Len_g49161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g12450.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g051820.3.1 Solyc05g051820 Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 7 61
No external refs found!