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  5. GSVIVT01020517001

GSVIVT01020517001


Description : Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020517001

Target Alias Description ECC score Gene Family Method Actions
AT1G03660 No alias Ankyrin-repeat containing protein 0.03 OrthoFinder output from all 47 species
AT4G03440 No alias Ankyrin repeat family protein 0.06 OrthoFinder output from all 47 species
AT4G03450 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G03470 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G14400 ACD6 ankyrin repeat family protein 0.07 OrthoFinder output from all 47 species
GSVIVT01001633001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01001639001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01001645001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01013586001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01014614001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01020902001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_00335 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g29940.1 LOC_Os07g29940 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g31070.1 LOC_Os07g31070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g34780.1 XBAT33, LOC_Os07g34780 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g03790.1 LOC_Os09g03790 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g15370.1 LOC_Os09g15370 Ankyrin repeat-containing protein At2g01680... 0.05 OrthoFinder output from all 47 species
LOC_Os09g15950.1 LOC_Os09g15950 Ankyrin repeat-containing protein At5g02620... 0.05 OrthoFinder output from all 47 species
LOC_Os09g16050.1 LOC_Os09g16050 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g17329.1 LOC_Os09g17329 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g09230.1 LOC_Os11g09230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g14570.1 LOC_Os11g14570 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os11g15460.1 LOC_Os11g15460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035134_P003 Zm00001e035134 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 982 1005
IPR026961 PGG_dom 1170 1278
IPR026961 PGG_dom 463 571
IPR020683 DUF3447 105 191
IPR020683 DUF3447 1021 1115
IPR020683 DUF3447 244 331
IPR020683 DUF3447 343 409
No external refs found!