GSVIVT01020069001 (AMY3, ATAMY3)

Aliases : AMY3, ATAMY3

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase

Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01020069001
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene13965.t1	AMY3, ATAMY3,...	alpha amylase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene40723.t1	AMY3, ATAMY3,...	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.12G070100.1	AMY1, ATAMY1,...	alpha amylase & original description: pacid=50600969...	0.03	OrthoFinder output from all 47 species
Ceric.17G028300.1	AMY1, ATAMY1,...	alpha amylase & original description: pacid=50617601...	0.05	OrthoFinder output from all 47 species
Gb_02250	AMY3, ATAMY3	alpha amylase	0.03	OrthoFinder output from all 47 species
Nbi_g39374	AMY1, ATAMY1	alpha amylase & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0420.g027363	AMY1, ATAMY1	alpha amylase & original description: CDS=1-1383	0.03	OrthoFinder output from all 47 species
Sam_g16056	No alias	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g47997	AMY3, ATAMY3	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0009916	alternative oxidase activity	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	518	774
IPR012850	A-amylase_bs_C	825	883

External Links

No external refs found!