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  5. GSVIVT01019629001

GSVIVT01019629001


Description : Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana


Gene families : OG0003017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019629001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00184390 evm_27.TU.AmTr_v1... Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G10790 No alias UBX domain-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g080785 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.04 OrthoFinder output from all 47 species
Cba_g27365 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.02 OrthoFinder output from all 47 species
Cre03.g200100 No alias Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g04810 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.02 OrthoFinder output from all 47 species
Len_g12508 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.03 OrthoFinder output from all 47 species
Pir_g35226 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010519 No alias not classified & original description: CDS=1-1575 0.05 OrthoFinder output from all 47 species
Smo37553 No alias Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g008510.3.1 Solyc08g008510 Plant UBX domain-containing protein 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e002124_P001 Zm00001e002124 Plant UBX domain-containing protein 10 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e039145_P002 Zm00001e039145 Plant UBX domain-containing protein 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR001012 UBX_dom 273 353
No external refs found!