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  5. GSVIVT01019391001

GSVIVT01019391001


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit


Gene families : OG0001612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019391001
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
AMTR_s00109p00033810 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.05 OrthoFinder output from all 47 species
AT4G11380 No alias Adaptin family protein 0.01 OrthoFinder output from all 47 species
AT4G23460 No alias Adaptin family protein 0.14 OrthoFinder output from all 47 species
AT5G11490 No alias adaptin family protein 0.16 OrthoFinder output from all 47 species
Adi_g013457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058274 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Adi_g078682 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Aev_g01490 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Aev_g02524 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.05 OrthoFinder output from all 47 species
Ala_g15640 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.04 OrthoFinder output from all 47 species
Ala_g16231 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Als_g46996 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Aob_g09058 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Aop_g04473 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Aop_g14503 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Azfi_s0267.g061012 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.04 OrthoFinder output from all 47 species
Cba_g04713 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Cba_g31750 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Ceric.13G014400.1 Ceric.13G014400 large subunit beta of AP-4 vacuole cargo adaptor complex... 0.07 OrthoFinder output from all 47 species
Ceric.37G056900.1 Ceric.37G056900 large subunit beta of AP-1 trans-Golgi network cargo... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.38 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.39 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre05.g234665 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.06 OrthoFinder output from all 47 species
Cre11.g478156 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder output from all 47 species
Dcu_g01903 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.16 OrthoFinder output from all 47 species
Dcu_g07725 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.24 OrthoFinder output from all 47 species
Dde_g06808 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.08 OrthoFinder output from all 47 species
Dde_g20964 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ehy_g02851 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.11 OrthoFinder output from all 47 species
LOC_Os01g43630.1 LOC_Os01g43630 large subunit beta of AP-4 vacuole cargo adaptor complex 0.16 OrthoFinder output from all 47 species
LOC_Os03g23950.1 LOC_Os03g23950 large subunit beta of AP-1 trans-Golgi network cargo... 0.2 OrthoFinder output from all 47 species
Len_g12570 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Lfl_g02298 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.12 OrthoFinder output from all 47 species
Lfl_g05633 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.1 OrthoFinder output from all 47 species
MA_10429323g0010 No alias Beta-adaptin-like protein A OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_4821g0010 No alias Beta-adaptin-like protein A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.18 OrthoFinder output from all 47 species
Mp6g09050.1 No alias large subunit beta of AP-4 vacuole cargo adaptor complex 0.13 OrthoFinder output from all 47 species
Msp_g00711 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.11 OrthoFinder output from all 47 species
Msp_g04742 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.02 OrthoFinder output from all 47 species
Nbi_g10984 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.11 OrthoFinder output from all 47 species
Nbi_g15154 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.04 OrthoFinder output from all 47 species
Ore_g04993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36319 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.05 OrthoFinder output from all 47 species
Pir_g09755 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Pir_g11812 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005044 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013913 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Sam_g19395 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.16 OrthoFinder output from all 47 species
Smo269763 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.14 OrthoFinder output from all 47 species
Solyc08g068210.3.1 Solyc08g068210 large subunit beta of AP-4 vacuole cargo adaptor complex 0.13 OrthoFinder output from all 47 species
Solyc08g081320.3.1 Solyc08g081320 large subunit beta of AP-1 trans-Golgi network cargo... 0.15 OrthoFinder output from all 47 species
Spa_g12477 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Spa_g16508 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.06 OrthoFinder output from all 47 species
Tin_g02154 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Zm00001e001693_P001 Zm00001e001693 large subunit beta of AP-1 trans-Golgi network cargo... 0.25 OrthoFinder output from all 47 species
Zm00001e020411_P002 Zm00001e020411 large subunit beta of AP-4 vacuole cargo adaptor complex 0.11 OrthoFinder output from all 47 species
Zm00001e027916_P001 Zm00001e027916 large subunit beta of AP-4 vacuole cargo adaptor complex 0.2 OrthoFinder output from all 47 species
Zm00001e038184_P001 Zm00001e038184 large subunit beta of AP-1 trans-Golgi network cargo... 0.24 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR015151 B-adaptin_app_sub_C 792 901
IPR002553 Clathrin/coatomer_adapt-like_N 15 533
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 686 781
No external refs found!